![]() ![]() )Ī DNAStringSet or RNAStringSet object of unaligned sequences. MaskAlignment: Mask Highly Variable Regions of An AlignmentĪlignTranslation ( myXStringSet, sense = "+", direction = "5' to 3'", readingFrame = NA, type = class ( myXStringSet ), geneticCode = GENETIC_CODE.MapCharacters: Map Changes in Ancestral Character States.LearnTaxa: Train a Classifier for Assigning Taxonomy.IdTaxa: Assign Sequences a Taxonomic Classification.IdLengths: Determine the Number of Bases, Nonbases, and Width of Each.IdentifyByRank: Identify By Taxonomic Rank.IdConsensus: Create Consensus Sequences by Groups.IdClusters: Cluster Sequences By Distance or Sequence.HEC_MI: Mutual Information for Protein Secondary Structure Prediction.Genes-class: Genes objects and accessors.FindSynteny: Finds Synteny in a Sequence Database.FindChimeras: Find Chimeras in a Sequence Database.ExtractGenes: Extract Predicted Genes from a Genome. ![]()
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